Blurres the image by splitting the images into small squares. The marker levels are then averaged within each square. All cells are considered, regardless of phenotype status
plot_marker_level_heatmap(sce_object, num_splits, marker)
Arguments
| sce_object | SingleCellExperiment object in the form of the output of format_image_to_sce |
|---|---|
| num_splits | Integer specifying the blurring level (number of splits) for the image. Higher numbers result in higher resolution. |
| marker | Marker to plot |
Value
A plot is returned
