Produces a scatter plot of the level of a marker in each cell. The level of the marker in all cells is shown, whether phenotyped as being positive or negative for the particular marker.

plot_cell_marker_levels(sce_object, marker)

Arguments

sce_object

Singlecellexperiment object in the form of the output of format_image_to_sce

marker

Marker to plot

Value

A plot is returned

Examples

plot_cell_marker_levels(SPIAT::formatted_image, "CD3")