Produces boxplots of marker levels for cells phenotyped as being positive for the marker, and those that where phenotyped as being negative.

marker_intensity_boxplot(sce_object, marker)

Arguments

sce_object

SingleCellExperiment object in the form of the output of format_image_to_sce

marker

Marker being queried

Value

A plot is returned

Examples

marker_intensity_boxplot(SPIAT::formatted_image, "CD3")