calculate_summary_distances_to_borders

Source: R/calculate_summary_distances_to_borders.R

Returns the mean, median and stardard deviation of the distances between a specified cell type to the borders

calculate_summary_distances_to_borders(
  sce_object,
  types_of_interest = NULL,
  column = NULL
)

Arguments

sce_object

SingleCellExperiment object in the form of the output of format_image_to_sce
types_of_interest

Vector of cell types to consider
column

String specifying which column the interested cell types are from

Value

A data.frame is returned