calculate the cross functions between two cell types to see if there is mixing between them
calculate_cross_functions(sce_object, method = "Kcross", phenotypes, column)
| sce_object | SingleCellExperiment object in the form of the output of format_image_to_sce |
|---|---|
| method | String that is the method for dependence calculation. Options: "Gcross", "Kcross", "Lcross", "Jcross" |
| phenotypes | Vector of phenotypes of interest |
| column | String that is the name of the column of the types |