calculate_all_distances_between_cell_types

Returns the distances between cells of different types. If none of the cell types are found, it will print an error message and return a vector of NAs

calculate_all_distances_between_cell_types(
  sce_object,
  cell_types_of_interest = NULL,
  column
)

Arguments

sce_object	SingleCellExperiment object in the form of the output of format_image_to_sce
cell_types_of_interest	Vector containing cell types to be considered, if NULL, all cell type combinations will be calculated
column	Column name with the cell types of interest to be considered

Value

A data.frame is returned.